Welcome to February 16, 2016 Gramene Database Webinar!
Plant Reactome (http://plantreactome.gramene.org) is a freely available resource of curated metabolic, signaling, and regulatory pathways from the reference species rice, and gene homology-based pathway projections for 58 other plant species including Arabidopsis, maize, grape, strawberry, tomato, etc. Plant Reactome uses a eukaryotic cell model for pathway visualization and allows uploading and analysis of omics data. Plant Reactome is the Pathway module of the NSF-funded international collaborative project called the Gramene database (www.gramene.org).
Dr. Sushma Naithani, an Assistant Professor Research at Oregon State University, will show how users can navigate the Plant Reactome database, compare pathways across two or more species, and conduct an analysis of expression data. Using transcriptomic data from grape (Vitis vinifera), she will show how to upload and visualize expression data on pathway diagrams, and extract relevant information/statistics.
Join us online on Tuesday, February 16, 2016, at 2:00 pm EST/11:00 am PST.
The Plant Reactome group has released 21 new rice pathways, focusing on carbohydrate biosynthesis, cofactor biosnythesis, and secondary metabolite biosnythesis.